Comments (3)
Hi @EAC-T ,
Our package Spectre uses CytoNorm as the primary batch alignment method. In an upcoming update, we'll have an update where you can perform alignment with whatever clustering approach you want (K-means, phenograph, etc). It's not exactly the same implementation as CytoNorm, but it's similar. Would this work for you?
Tom
from cytonorm.
Hi @tomashhurst
Yes that would be great!
Thank you
from cytonorm.
Hi @EAC-T ,
I'm afraid that would have been out of scope for our implementation, so I'm very happy to hear @tomashhurst will be able to provide this in the Spectre package!
All the best,
Sofie
from cytonorm.
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