Douglas Miller's Projects
matlab fuction for reading abf files including v2.0 files
Data acquisition for patch clamp ephys / optogenetics / imaging experiments
Jupyter notebooks for analysis of dendritic two-photon calcium imaging data using the CaImAn toolbox.
A repository where I bumble my way through becoming a rustacean
Liquid Junction Potential Calculator :zap:
Mask R-CNN for object detection and instance segmentation on Keras and TensorFlow
A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.
motion correction
movie preprocessing
pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files
A simple custom GUI for tracking electrophysiology and imaging experiments.
A calculator for determining brain entry position of a pipette
pyPrairieViewPatch is a python package for interacting with electrophysiology data generated from PrarieView
Robust and Efficient Image Alignment through Simultaneous Low Rank and Sparse Decomposition
Public website
Trend Filter Denoising
Raw CSV files for PLOS submission