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saisiqu's Projects

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Grouping of Lymphocyte Interactions by Paratope Hotspots

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insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis method that aids interpretation of large-scale gene expression data. The method introduced here includes coexpression analysis and gene importance estimation to robustly identify relevant pathways and biomarkers for patient stratification.

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Dissecting the effects of DNA copy number variations on transcriptional programs at single-cell resolution

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Software tools for the analysis of epitope-specific T cell receptor (TCR) repertoires (scroll down for the README)

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