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Comments (3)

saketkc avatar saketkc commented on September 22, 2024

This looks like a bug, but I am not sure why I cannot reproduce it with other SRPs (SRP481543 for example)

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arcones avatar arcones commented on September 22, 2024

One detail I should have commented before is that I am integrating pysradb in a python project, not using it from terminal. My application uses pysradb 2.2.0 and does:

from pysradb import SRAweb

[...]
srp = 'SRP481544'
raw_pysradb_data_frame = SRAweb().srp_to_srr(srp)
srrs = list(raw_pysradb_data_frame['run_accession'])

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saketkc avatar saketkc commented on September 22, 2024

I think it is specific to this SRP - are there other examples where you have run into the same error?

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