Comments (3)
saketkc
commented on July 20, 2024
Thanks for trying out our experimental feature @sebboegel, appreciate your efforts! I will page in @bscrow who has been working on this.
@bscrow do you know the source of discrepancy?
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bscrow
commented on July 20, 2024
Yep it is a bug. I will push a fix in the next update.
Thanks for the bug report!
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sebboegel
commented on July 20, 2024
Thank you very much for the fast response and thanks for the tool. It is really valuable. One thing i love is that the output table contains the pmid, which i havent seen in the metadata txt file one can download from SRArunselector.
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Related Issues (20)
- Stats not saved in output file HOT 3
- [ENH] MD5 value is not HOT 1
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- [BUG] SRX to SRR produces incorrect results when multiple SRRs are present
- [BUG] linux-64 Conda version out of date HOT 7
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- [BUG] gse-to-srp not producing results HOT 1
- [BUG] gse_to_srp returns an error in Python API HOT 1
- [ENH] Include data processing steps, reference to which the reads were aligned or if possible lab protocol into the main table HOT 1
- [BUG] The error arises from setting a deprecated value for the "display.max_colwidth" option in pandas. HOT 2
- [BUG] Parsing error in gse-to-srp HOT 1
- installation using conda fails with UnsatisfiableError HOT 3
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- Data download is interrupted after a few minutes HOT 7
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- [ENH] Super useful package!
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