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calculate-suv

Tiny library for calculating Standardized Uptake Value for Nuclear Medicine (i.e. PET, SPECT)

cornerstone3d

Cornerstone is a set of JavaScript libraries that can be used to build web-based medical imaging applications. It provides a framework to build radiology applications such as the OHIF Viewer.

deeponcology

Deep Learning tools for automatic segmentation of medical images

dicom-to-cnn

Python Library to handle Input / Output conversion in Dicom <=> Convolutional Neural Network

dicom_decompress

Dicom transcoding for compressed DICOM

fijiplugins

plugins for Fiji originally developed at Beth Israel hospital

laravel

Laravel is a web application framework with expressive, elegant syntax. We’ve already laid the foundation for your next big idea — freeing you to create without sweating the small things.

medicaldetectiontoolkit

The Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net, as well as a training and inference framework focused on dealing with medical images.

moodle-mod_dicomviewer

moodle_dicomviewer_website

Static Website for Dicom Viewer plugin for Moodle

moose

MOOSE (Multi-organ objective segmentation) a data-centric AI solution that generates multilabel organ segmentations to facilitate systemic TB whole-person research.The pipeline is based on nn-UNet and has the capability to segment 120 unique tissue classes from a whole-body 18F-FDG PET/CT image.

nifti-reader-js

A JavaScript NIfTI file format reader.

orthanc-tools-js

New web-based version of Orthanc Tools : GUI and high level DICOMs tools based on Orthanc APIs

orthanc4toolsjs

Builing Osimis/Orthanc derivated image for QNAP

orthanc_helloworld

trying to learn orthanc plugin creation

orthanc_tools

DICOM tools built on Orthanc API in Java

orthancgif

pet_ct_tools

petctviewer.org

Replacement for petctviewer.org website

projectweek

Website for NA-MIC Project Weeks

pyradiomics_gui

JAVA GUI for pyRadiomics

rp

salt

Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hierarchical relationships in the data.

scintigraphy

Open source Scintigraphy programs for ImageJ

scintigraphy_documentation

Documentation of Scintigraphy

tmtv-net

This repository employs a deep-learning method for the automated segmentation of total metabolic tumor volume (TMTV) in whole-body [18]F-FDG PET/CT images, with an emphasis on multi-center generalizability.

totalsegmentator

Tool for robust segmentation of 104 important anatomical structures in CT images

viewers

OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages

widen_connector