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Sam Seaver's Projects

fba_tools icon fba_tools

A suite of metabolic modeling tools created using the KBase SDK

fbafileutil icon fbafileutil

Functions for accessing and saving KBase FBA related data as files.

genome_annotation icon genome_annotation

The genome annotation service provides automated gene annotation based on the RAST system. This deploys both client and service components.

kbasefbamodeling icon kbasefbamodeling

Flux balance modeling service. Deploys both the client and service codes.

kbasereport icon kbasereport

experiments with a report data type for the kbase sdk

modelseeddatabase icon modelseeddatabase

This repository contains the definitive copy of the biochemistry and metadata used to construct models using the ModelSEED/ProbAnno approach

modelseedpy icon modelseedpy

Python package for building and analyzing models using ModelSEED

numonster icon numonster

A tool for mining atomic coordinate data for macromolecular complexes in the RCSB Protein Data Bank

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