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Name: Sarah Nadeau
Type: User
Bio: Bioinformatician @ Institute of Molecular and Clinical Ophthalmology Basel
Name: Sarah Nadeau
Type: User
Bio: Bioinformatician @ Institute of Molecular and Clinical Ophthalmology Basel
This repository has code to build containers for bioinformatics tools.
This repository has bioinformatics workflows written with Nextflow.
An automated nextstrain build for Burkholderia pseudomallei
Code for the publication "The origin and early spread of SARS-CoV-2 in Europe"
Code for the manuscript "Swiss public health measures associated with reduced SARS-CoV-2 transmission using genome data".
This repository hosts materials for the Data Analysis course hosted by IOB Scientific Computing.
:package: :whale: Dockerfiles and documentation on tools for public health bioinformatics
R package for deconvolution & estimation of effective R_e of Covid-19
A CSS to make your page look great.
Transcript discovery and quantification with long RNA reads (Nanopores and PacBio)
Tutorial for the coalescent with reassortment
An example of my coding work.
Utility scripts for working with single-cell RNA seq data
Generate a core genome alignment, call SNPs, and make a tree based on bacterial genome assemblies.
This repository records efforts to reproduce the results of Cocking et al.'s SWGA for Coxiella burnetii.
This repository is to record efforts at primer design for selective whole-genome amplification for pathogenic Leptospira.
Get a small, representative genome set from a large phylogenetic tree.
A collection of documented examples using TreeTime
This project houses a Nextflow workflow to propose primers for selective whole-genome amplification.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.