schmiedc Goto Github PK
Name: Christopher Schmied
Type: User
Bio: Research Data Scientist, Computer Vision, Bioimage Analysis, Data Analysis, Microscopy.
Twitter: ChriSchmied
Christopher Schmied's Projects
auto_qc
ImageJ 1.x plugin for automatic microscopy quality control - an ImageJ plugin prototype
celldisplacement_dzne
scripts for assessment of neuronal and glial pathologies
cerebellar_organoid
Machine learning approach and analysis scripts for analyzing organoids
checklist_images_analysis
Test github pages site for Quarep-Limi WG12
clij2
GPU-accelerated image processing for everyone
first-test
napari plugin test
imagej.github.io
GitHub Pages for ImageJ
list-of-update-sites
The update sites ImageJ knows about automatically
measureint
Measure and analyse mean intensity in nuclei and cell segmentation
minimal
Minimal is a Jekyll theme for GitHub Pages
neubias_analystschool2019
NEUBIAS Bioimage Analyst School 2019
neubias_analystschool2020
orgamapper
ImageJ plugin for detecting and mapping organelles within a cell
orgamapper_rshiny
Rshiny workflow for processing OrgaMapper results
phluorin-rscripts
R scripts for processing and visualizing data generated by the pHluorin workflow
pipeline_2.0
pipeline_3.0
qt-test
playground for qt
snakemake-workflows
snakemake workflows produced, tested and used at MPI CBG
spim_registration
Software for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data
synactj
ImageJ plugin for analyzing synaptic vesicle dynamics using Synapto-pHluorin.
synactj_shiny
teaching-dl-course-2020
EMBL Deep Learning course 2020-21 exercises and materials
wg12_checklists_for_image_publishing
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