Comments (5)
The compiler does not find xtensor
.
Did you follow the steps described in installation?
If you did, your conda environment should contain xtensor
. You can check this with conda list
.
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Thanks for the response, it works now!
I can run your code, but the results seem different. WE really want to reproduce your experiments.
It seems that we need to do an extra edge detection process. Also, I found the result is not good as the paper says
from mutex-watershed.
Could you elaborate a bit? How did you obtain the images you show here. What experiments exactly did you run?
It seems that we need to do an extra edge detection process.
The mutex watershed will output a label image. It's trivial to translate this to an edge image, e.g. using this functions.
Also, I found the result is not good as the paper says
Based on which criterion? Note that the algorithm's quality depends on the input predictions, so improving network predictions is usually the best way to improve results.
from mutex-watershed.
Thanks, I know how it works now!!
from mutex-watershed.
Thanks, I know how it works now!!
You're welcome. I am closing this for now, feel free to raise another issue if you have more questions.
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Related Issues (8)
- How to set the stride in compute_mws_segmentation
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- how did you generate those data isbi_train_volume.h5 and isbi_test_volume.h5 HOT 3
- data repository not reachable HOT 2
- Adaptation to EM samples with extracellular space HOT 1
- How to create the affinity? HOT 6
- How to generate 'labels/gt_segmentation' from 'labels/membranes' ? HOT 6
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