use abbreviations for evidence codes

[scigraph]

use abbreviations for evidence codes

[jnguyenx]

so we can either replace the existing label with a synonym, or add a new field like label_short (not sure that the current golr schema supports that though).

One concern is that there are many synonyms, how can we select the "right" one?

From SciGraph:

*http://www.geneontology.org/formats/oboInOwl#id =[ECO:0000501]

*http://www.w3.org/2000/01/rdf-schema#label =[evidence used in automatic assertion]

*iri =[http://purl.obolibrary.org/obo/ECO_0000501]

*label =[evidence used in automatic assertion]

*synonym =[inferred from electronic annotation],[IEA]

[cmungall]

In the yaml for the loader it's possible to map arbitrary APs into (I think) arbitrary Neo4j tags (currently: synonym, definition)

We would add a new tag for 'code' (or perhaps abbreviation)

The tricky part is that you have to inspect the axiom annotation to determine (note: axiom annotations get lost in Neo4j)

If this turns out to be too hard we can make a new annotation property in ECO

[nlwashington]

shouldn't the synonym have some kind of property to mark it as an abbreviation already? it does not seem to be present in the graph: http://geoffrey.crbs.ucsd.edu:9000/scigraph/graph/ECO:0000501.graphson?project=%2A

[cmungall]

You can see it here, but you don't see the axiom annotations in scigraph: http://geoffrey.crbs.ucsd.edu:9000/scigraph/graph/ECO:0000501.json

It will probably be easiest to do this upstream