Comments (3)
RC1: https://github.com/seqan/seqan3/releases/tag/3.3.0-rc.1
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RC1 builds with GCC 13 in Debian for me; I'll upload soon to our experimental repository
Here are the patches we are still carrying; if any of them can be adapted so we don't have to carry them, that'd be great
https://salsa.debian.org/med-team/seqan3/-/tree/debian/experimental/debian/patches
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RC2: https://github.com/seqan/seqan3/releases/tag/3.3.0-rc.2
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Related Issues (20)
- gcc13: specialization after instantiation
- push_back for aa27 HOT 5
- Bug: bgzf_thread_count not available if zlib not installed
- [Alignment] Wrong alignment score HOT 8
- Pipe notation does not compile with ranges::to HOT 2
- [Alignment] Is there a way to run align_pairwise without traceback? HOT 3
- MacOS - difficulty configuring cmake HOT 3
- char_traits.h:431:56: error: ‘void* __builtin_memcpy(void*, const void*, long unsigned int)’ HOT 2
- [IO] Typedef for numeric reference ID type, constant for invalid reference ID in SAM/BAM input HOT 2
- Invalid SSL certificate on docs.seqan.de
- How to update an already built FM-Index HOT 2
- [IO] constructors in sam_file_output handle do not forward rvalue references to initialise_header_information() HOT 1
- FASTA IO parses newlines into sequence when alphabet is char
- Running Align Pairwise with linear gap Penalty and faster runtime than for affine gap penalty HOT 3
- [IO] Make `seqan3::sam_file_header::program_info_t` easier to copy HOT 6
- GCC 13 errors HOT 7
- Use OS/system packaged sdsl library HOT 10
- Tests fail to compile HOT 2
- several same-score pairwise alignments HOT 4
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