sfu-mial Goto Github PK
Name: SFU Medical Image Analysis Lab
Type: Organization
Twitter: Hamarneh_MIA
Location: Vancouver, Canada
Name: SFU Medical Image Analysis Lab
Type: Organization
Twitter: Hamarneh_MIA
Location: Vancouver, Canada
Datasets for skin image analysis
CIRCLe: Color Invariant Representation Learning for Unbiased Classification of Skin Lesions. Mirror of https://github.com/arezou-pakzad/CIRCLe
Colocalization metrics and distances for images or their sparse representations. Mirror of https://github.com/bencardoen/Colocalization.jl
A scalable Julia package to transparently validate and transform large biomedical datasets using human readable recipes that are translated to machine verifiable templates. Mirror of https://github.com/bencardoen/DataCurator.jl
Treatment efficacy estimation based on microscopy images on RxRx19a
Official code for "DermSynth3D: Synthesis of in-the-wild Annotated Dermatology Images". A data generation pipeline for creating photorealistic in-the-wild synthetic dermatalogical data with rich multi-task annotations for various skin-analysis tasks.
Addresses the problem of reconstructing images acquired by diffuse optical tomography using deep learning.
ERGO: Efficient Recurrent Graph Optimized Emitter Density Estimation in Single Molecule Localization Microscopy Mirror of https://github.com/bencardoen/ERGO
Object / density detection in astigmatic superresolution dSTORM microscopy. Mirror of https://github.com/bencardoen/ERGO.jl
Mirror of https://github.com/bencardoen/ERGO.py
Repository for our deep multi-frequency fusion paper in DOT imaging.
Gist to collect urls/tips/tricks/configs for setup of IDEs (VSCode, vi, neovim, cgpt, copilot, ...)
A set of scripts to streamline remote working with clusters. Mirror of https://github.com/bencardoen/labtools
Repository for our limited angle deep learning based DOT image reconstruction
Detects sufficient and necessary conditions for pattern inversion conditional on log transform Mirror of https://github.com/bencardoen/LogParadox.jl
Code supporting our NeurIPS paper MaskTune: Mitigating Spurious Correlations by Forcing to Explore
A template to accelerate the release of state of the art software accompanying papers released at Prof. Hamarneh's medicalimageanalysis.com
Repository for our deep multitask paper in DOT imaging.
This repository provides code for training, inference of endoplasmic reticulum segmentation method nERdy+, and the analysis of the dynamics presented in the paper nERdy: network analysis of endoplasmic reticulum dynamics
The official repository for the paper "Learning-to-Count by Learning-to-Rank", accepted as an oral presentation at CRV2023
Example on how to leverage Singularity on HPC. Mirror of https://github.com/bencardoen/singularity_slurm_cuda
Mirror of https://github.com/jeremykawahara/skin3d
Segment-Like-Me: 1-shot image segmentation using Stable Diffusion
SLURM Monitor to detect node health and notify Slack in case of events. Mirror of https://github.com/bencardoen/SlurmMonitor.jl
Computational tools for single molecule localization / superresolution microscopy (point clouds). Mirror of https://github.com/bencardoen/SmlmTools.jl
Superresolution visualization of 3D protein localization data from a range of microscopes . Mirror of https://github.com/bencardoen/smlmvis
SPECHT is a Julia implementation of a contrastive weakly supervised object detection and identification method for fluorescence microscopy. Mirror of https://github.com/bencardoen/SPECHT.jl
A Julia package to detect contacts below the precision of a superresolution microscope between 2 subcellular organelles in 2-channel superresolution (STED) microscopy. Mirror of https://github.com/bencardoen/SubPrecisionContactDetection.jl
Synthesize, Rank, Count; A Method for unsupervised crowd counting using latent diffusion models
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
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Bring data to life with SVG, Canvas and HTML. 📊📈🎉
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Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
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Some thing interesting about visualization, use data art
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We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.