sguizard Goto Github PK
Name: Sébastien Guizard
Type: User
Company: The Roslin Institute
Bio: Roslin Institute Core Scientist
Location: Edinburgh
Name: Sébastien Guizard
Type: User
Company: The Roslin Institute
Bio: Roslin Institute Core Scientist
Location: Edinburgh
GENE-SWitCH project Iso-Seq analysis pipeline
Conda recipes for the bioconda channel.
Personnal bioinfo scripts
Scripts for bioinfo data analysis
DensityMap is perl tool for the visualization of features density along chromosomes
Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq
GENE SWitCH Transcriptome Annotation by Modular Algorithms (for long read RNA sequencing data)
A definition file for building IsoSeq v3 singularity container
A repo to store singularity version of mixcr docker image
Testing building mulled containers for multi-requirement tools.
Aggregate results from bioinformatics analyses across many samples into a single report.
Test data for MultiQC. See https://github.com/ewels/MultiQC
Code and files for the main nf-core website.
Config files used to define parameters specific to compute environments at different Institutions
Genome annotation with PacBio Iso-Seq. Takes raw subreads as input, generate Full Length Non Chemiric (FLNC) sequences and produce a bed annotation.
Repository to host tool-specific module files for the Nextflow DSL2 community!
Python package with helper tools for the nf-core community.
A simple nf script to run feelnc module (from FAANG/analysis-TAGADA)
A nextflow pipeline for TCR repertoire building with MiXCR
Finding Maximal Exact Matches (MEMs) using a Sampled LCP Array
A small-RNA sequencing analysis pipeline
A definition file for building SQANTI3 singularity container (adapted from [joelnitta/sqanti3-docker](https://github.com/joelnitta/sqanti3-docker))
A repository for generating strobemers and evalaution
TAMA Dockerfile
A definition file for building TAMA singularity container
Test data to be used for automated testing with the nf-core pipelines
uLTRA is a long-read splice aligner with high accuracy from using a guiding annotation
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.