shaniamare Goto Github PK
Name: Shani Amarasinghe
Type: User
Company: Monash Biomedicine Discovery Institute
Bio: Postdoc, Bioinformatics, RNA-Seq, ATAC-Seq. single-cell, long-reads
Twitter: ShaniAmare
Location: Melbourne, Victoria
Name: Shani Amarasinghe
Type: User
Company: Monash Biomedicine Discovery Institute
Bio: Postdoc, Bioinformatics, RNA-Seq, ATAC-Seq. single-cell, long-reads
Twitter: ShaniAmare
Location: Melbourne, Victoria
A minimal book example using bookdown
Cell type decovolution in bulk RNA-Seq using scRNA-Seq data
Full-Length Alternative Isoform analysis of RNA
A safe place for the personal scripts used in the long-read benchmarking project.
facelift temporary database for long-read-tools.org
The space to put the nf-core files I am implementing
a pipeline for single cell data analysis
The repo to store the code for the manuscript containing scPipe upgrades (Amarasinghe et al, 2023)
Table of software for the analysis of single-cell RNA-seq data.
The repository for the personal website
The SpatialDecon library implements the SpatialDecon algorithm for mixed cell deconvolution in spatial gene expression datasets. (This algorithm also works in bulk expression profiling data.)
SquiggleKit: A toolkit for manipulating nanopore signal data
ASI Systems Immunology x OzSingleCell Hackathon 2023 in Melbourne Australia
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.