an-interesting-story-about-cancer

A first attempt blog for my website

bash_tutorial

Going through a tutorial on bash scripting

batch_pipeline

Example workflows for a multi-step array job on AWS Batch

can-iq-be-predicted-from-the-dna-of-an-individual-

Debate Report

comparison-of-salmon-and-kallisto

This is a course project, in which I had to compare two bioinformatics tools and compare their accuracies and speeds.

differential-gene-expression-analysis-of-single-cell-rnaseq-data

An analysis of head and neck tumour single cell RNA sequencing data from NCBI database

gene-expression-prediction-using-deep-neural-network

Gene Expression Prediction Using Deep Neural Network employing information about hiddenness of regulatory elements of DNA

gene-therapy

notes and other details about my project on Gene Therapy with Dr. Byrne

gene_networks_dl_processor

A Deep Learning model to predict the approximate frequency of the different states of a gene network.

gget

🧬 gget enables efficient querying of genomic reference databases

github-readme-stats-shashkat

:zap: Dynamically generated stats for your github readmes

hello-world

getting used to github

hindi_music_notes_practice

This is a simple tool which one can use to practice musical notes on any instrument (specifically designed for flute). The notes will be displayed in a random order with a time period specified by the user as per their proficiency.

immunostaining-and-tirf-microscopy

My project report for second UGP under Professor Nitin Mohan (course- BSE399A)

inferring-evolution-of-oral-cancer-in-patients

Details of my project involving analysis of oral tumour sequencing data and inferences about evolution from it

integration-of-adrenal-gland-atacseq-and-rnaseq

Integration of ATACseq and RNAseq for Adrenal Gland Tissue data from ENCODE

libraries

This is where I keep details of my work in the University Libraries

machine-learning-for-scientists-group-project

Record of our group project for the course Machine Learning for Scientists (02-620), Spring 2024.

mosaic-single-cell-data-integration

my-blog

needleman-wunsch-algorithm

An implementation of the Needleman Wunsch Algorithm

optogenetics-will-make-electrical-stimulation-irrelevant

BSE656A (Neurobiology Course)-Debate Report

oralproj_repo

Progress of project on oral cancer data analysis

pybiomart

A simple pythonic interface to biomart.

recitationdemo

Demo for recitation in Programming for Scientist

shashkat

Github landing page

shashkat.github.io

My Personal website/blog in which I add information about my latest projects

slithbot

Attempt at developing a bot of the slither.io game

ugp--using-eeg-and-decision-making-to-understand-stress

This repository contains all the files regarding my 5th semester Undergraduate Project- Using EEG and Decision Making to Understand Stress

understanding-gene-network-motifs-toggle-polygons

An in depth analysis of gene networks, initially focusing on a subtype- toggle polygons, then gradually increasing their generalness