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Name: Sheina Sim
Type: User
Company: USDA-ARS DKI US PBARC
Twitter: sheina_sim
Location: United States
Blog: http://sheinasimlab.org/
Name: Sheina Sim
Type: User
Company: USDA-ARS DKI US PBARC
Twitter: sheina_sim
Location: United States
Blog: http://sheinasimlab.org/
Scripts used to assemble the Anastrepha ludens genome
Scripts used to assemble the Anastrepha obliqua genome
Creates a tab-delimited summary blurb of BlobTools output.
Scripts used to assemble the Bombus huntii genome
Extracts records from a fasta based on a list of fasta headers.
Use genotype data (biallelic SNP data in .vcf) to identify X or Z-linked scaffolds.
Identify duplicate contigs or scaffolds from BUSCO search. Contigs or scaffolds are identified as duplicates when they only contain duplicate BUSCOs and their removal does not impact the number of complete BUSCOs.
Remove CCS reads with remnant PacBio adapter sequences and convert outputs to a compressed .fastq (.fastq.gz).
Pipeline for generating a linkage map and supporting files for QTL analysis
Python script that answers all of life's questions
mvMapper (Multivariate Mapper) is an interactive data exploration tool for multivariate analyses with associated geographic location information.
Commands for performing a population genomic analysis from genome assembly to population genomic data visualization.
Visualize your raw Nanopore or PacBio sequences from fastq
Return .fasta containing records smaller than or larger than desired length.
Repository for commands and scripts used in data analysis for a manuscript
Write NCBI .agp file from scaffold fasta
Play with these text files and hone your vim skills
Identify X/Z and Y/W linked-scaffolds from genotype heterozygosity and read depth data.
Yet Another Contig and Scaffold Stat Finder
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.