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Shicheng Guo's Projects

metastaar icon metastaar

An R package for performing MetaSTAAR procedure in whole-genome sequencing studies

metawrap icon metawrap

MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis

methclone icon methclone

Automatically exported from code.google.com/p/methclone

methgo icon methgo

MethGo: a comprehensive tool for analyzing whole-genome bisulfite sequencing data

methpipe icon methpipe

A pipeline for analyzing DNA methylation data from bisulfite sequencing.

methrix icon methrix

An R :package: for fast and flexible DNA methylation analysis

methylation-2 icon methylation-2

All the codes for the DNA methylation pipeline using IDAT files from Illumina Human Methylation 450k and EPIC

methylflow icon methylflow

Cell-specific methylation pattern reconstruction

methyliftover icon methyliftover

A utility to map bisulfite sequencing data to the Illumina 450K methylation CpG set

methylnet icon methylnet

Modular framework for deep learning predictions on methylation data.

methylpy icon methylpy

methylpy is a whole genome bisulfite sequencing analysis pipeline. It is developed by Mattew D. Schultz.

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