Shicheng Guo's Projects
R code for meta-analysis books
A meta-analysis package for R
An R package for performing MetaSTAAR procedure in whole-genome sequencing studies
A collection of Galaxy-related training material
MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis
MetaXcan software and manuscript
Automatically exported from code.google.com/p/methclone
MethGo: a comprehensive tool for analyzing whole-genome bisulfite sequencing data
A pipeline for analyzing DNA methylation data from bisulfite sequencing.
An R :package: for fast and flexible DNA methylation analysis
methylation haplotype based analysis
A methylation workflow
All the codes for the DNA methylation pipeline using IDAT files from Illumina Human Methylation 450k and EPIC
Cell-specific methylation pattern reconstruction
A utility to map bisulfite sequencing data to the Illumina 450K methylation CpG set
R package for DNA methylation analysis
Modular framework for deep learning predictions on methylation data.
methylpy is a whole genome bisulfite sequencing analysis pipeline. It is developed by Mattew D. Schultz.