simleo Goto Github PK

about

Website about the project WorkflowHub

ansible-hadoop

Install and configure Hadoop

avroknife

Utility for browsing and simple manipulation of Avro-based files

binder

Binder, tool for automatic generation of Python bindings

binder-docker

Docker images for https://github.com/RosettaCommons/binder

bio-formats-fiji

A simple POM to update Bio-Formats on a Fiji distribution

bioblend

A python library for interacting with CloudMan and Galaxy API

bioformats

Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment (particularly UW-Madison LOCI and Glencoe Software). Bio-Formats is released under the GNU General Public License (GPL); commercial licenses are available from Glencoe Software.

biotracks

A repository for data package representation for cell tracking data

ccs-bam-to-fastq-qc-crate

Workflow Testing RO-Crate setup for CCS.BAM to FASTQ + QC

celery-example

Example of using Celery as a lightweight distributed computing framework

cellprofiler

CellProfiler is open-source cellular image analysis software.

cmake-docker

Docker images for CMake

cmso-datasets

Metadata for curated CMSO datasets

cmso-samples

Sample data submitted to CMSO for testing

cmso-training

Training material for the CMSO formats & API

conda_builds

configuration-files

ISAconfiguration files which have been created by the ISAconfigurator. These can be used by ISAcreator, ISAvalidator, ISAconverter and the BII Data Management Tool

cpm-ro-crate

RO-Crate profile for the Common Provenance Model

cwlprov-py

cwlprov: Command line tool and Python API to explore Research Objects containing provenance of Common Workflow Language executions

cwltool

Common Workflow Language reference implementation

datacube-core

Open Data Cube analyses continental scale Earth Observation data through time

datapackage-py

A Python library for working with Data Packages.

deephealth-pipelines

dh-docker-images

ecvl

European Computer Vision Library

ecvl-old

European Computer Vision Library

eddl

European Distributed Deep Learning (EDDL) Library

galaxy

Data intensive science for everyone.

galaxy2cwl

Standalone version tool to get cwl descriptions (initially an abstract cwl interface) of galaxy workflows and Galaxy workflows executions.