sivasan Goto Github PK

anvio-an-analysis-and-visualization-platform-for-omics-data

An analysis and visualization platform for 'omics data

bacarena

agent based modelling

bacterial-genomics-tutorial

barbiq---method-to-identify-bar-sequences-16s-rrna-sequences-and-cotus-

method to identify Bar sequences (16S rRNA sequences) and cOTUs (cell-based taxa) and to quantify the identified cell numbers of each cOTU

beav-bacterial-genome-and-mobile-element-annotation-pipeline

BEAV: Bacterial Element Annotation reVamped

book

cgview_comparison_tool

The CGView Comparison Tool (CCT) is a package for visually comparing bacterial, plasmid, chloroplast, and mitochondrial sequences.

cogclassifier

A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category

coge-comparative-genomics-platform

CoGe (Comparative Genomics) Platform

comparative_genomics

Micro 612 genomics workshop

data

deimos---data-extraction-for-integrated-multidimensional-spectrometry

dorado

Dorado-Oxford Nanopore's Basecaller

easymicroplot

R package for downstream Microbiome analysis

gapseq---bacterial-gene-pathway-finder

Informed prediction and analysis of bacterial metabolic pathways and genome-scale networks

gbkviz

Easy-to-use web application for visualization and comparison of genomes in Genbank file

genetonic

Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail

gggenomes

A grammar of graphics for comparative genomics

goboodo---google-book-downloader

A Google book downloader with proxy support.

gsmer

Strain/species identification in metagenomes using genome-specific markers

imet-samples

Software and XML files

imodulonsdb_modulome-workflow

Workflow to download, process, and explore microbial RNA-seq data from NCBI SRA

mcycdb---methane-cycling-database

medium-unlimited

A browser extension to read medium.com articles for free without membership.

metapro_tutorial

Microbiome tutorial, running on MetaPro

mgcplotter

Microbial Genome Circular plotting tool for comparative genomics using Circos

microbeannotator

Pipeline for metabolic annotation of microbial genomes

modulome_paeru1.0---bacterial-rna-data

orforise

Comparison pipeline for Prokaryote Protein Coding Gene Predictors

panakeia---bacterial-pan-genome-analysis

Prokaryotic Pangenome Analysis