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Sehrish Kanwal's Projects

amgit icon amgit

Modified version of Pro Git

bcbio-nextgen icon bcbio-nextgen

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

blair-walden-project icon blair-walden-project

The Blair Walden Project: in 1845 Henry David Thoreau went to live in the woods... a year later his journal was found.

calc icon calc

A simple python calculator

megaqc icon megaqc

Web application to collect and visualise data across multiple MultiQC runs.

mosdepth icon mosdepth

fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing

play icon play

The expert in anything was once a beginner!!!

tools-iuc icon tools-iuc

Tool Shed repositories maintained by the Intergalactic Utilities Commission

vcf-venn icon vcf-venn

A tool to compare variants contained within multiple vcf format files, to determine common and unique variants to each file. To write these variants to a new file also in vcf format.

wgs-sample-qc icon wgs-sample-qc

Repository to host ongoing discussions by GHIF members on developing a reference implementation for QC of WGS results

workflows icon workflows

Community maintained workflows & tools (with examples)

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