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aptasuite

A full-featured software collection for the comprehensive analysis of HT-SELEX experiments with both graphical and command line based user interfaces.

co-select-paper

colors

cytoscape-app-samples

Cytoscape 3 sample code for App developers.

dotfiles

Dotfiles.

dynnetwork

Automatically exported from code.google.com/p/dynnetwork

ems2

Improved algorithms for findinding edit distance based motifs

evovision

Analysis of retinal RNA-seq data across 108 species

ggseqlogo

Publication-quality sequence logos in R

kmc

Fast and frugal disk based k-mer counter

multiscale_phate

Creating multi-resolution embeddings and clusters from high dimensional data

ouch

Ornstein-Uhlenbeck models for phylogenetic comparative hypotheses

perfectread

Filter perfect (error-free) reads from a collection of reads with substitution errors

presentations

NIH BYOB Presentation Materials

scholar_alters

Parse unread emails from Google Scholar alerts and sort publication by relevance

scpopcorn

A python tool to do comparative analysis of mulitple single cell datasets.