srusher Goto Github PK
Name: Samuel Rusher
Type: User
Company: Bioinformatics Developer with CDC
Bio: Bioinformatics | Experience with Bash, Nextflow / Groovy, Python, Perl, PHP, Java, SQL, R, HTML, CSS, and JavaScript
Location: KY
Name: Samuel Rusher
Type: User
Company: Bioinformatics Developer with CDC
Bio: Bioinformatics | Experience with Bash, Nextflow / Groovy, Python, Perl, PHP, Java, SQL, R, HTML, CSS, and JavaScript
Location: KY
A pipeline bash script used for the retrieval, assembly (alignment and scaffold assembly), gene annotation, and RNA seq analysis of B. Thuringiensis sequence reads
This program uses BioJava 1.7.1 packages to intake a FASTA file and parse out ORFs 1-3
This program is designed to convert a DNA string into a palindrome utilizing the fewest possible nucleotide insertions - all bases from the original sequence are preserved
This program breaks apart a DNA string and dispalys each amino acid associated with each codon
IDs Ebola positive sequence reads
This program will import a fasta file, parse out the sequence ID with its associated DNA sequence, and allow the user to retrieve a DNA sequence by entering in the appropriate sequence ID
K-means Cluster analysis of gene expression levels provided by adrenal carcinoma cells (expression data retrieved from Bioconductor)
A simple GUI I made in Java using the javax.swing library
Analyzes long read and short-paired read data for pathogens
This program utilizes regex patterns to locate the Zinc Finger protein domain from a FASTA file. The output will produce every Accession ID, the associated protein sequence and the Zinc FInger domain underlined in each prtoein sequence.
Repo of notes and projects I worked on through my Python + Machine Learning course
This program will read a DNA sequence from a .txt file and find each cut site and fragment length produced for a given restriction enzyme
This pipeline identifies genes or genomic segments which most closely resemble the genome-wide phylogenetic signal of a given organism using the Kendall Tau rank correlation statistic
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.