Comments (1)
This should be applied in cases of initialization and exporting to public db
from bifrost.
Related Issues (20)
- create a docker for bifrost launcher HOT 1
- Fix setup to install indexes for DB and species install.
- Change it so components can be re-installed onto themselves (for development adjustments to config.yaml) as deleting from DB to update is less than ideal.
- Clean up setup folder. shouldnt be needed but currently dockerfiles in others are pulling common resources from it. Should move those into the components (or base)
- Columns can be added/hidden by the user
- Download finders result for selected samples as csv
- Add input species for components with a species requirement. This is so if the user changes the species the component still has info on which species it ran against
- Update bifrostlib for samplecomponents to reflect schema2.0 and beyond, right now its more hardcoded for snakemake purposes
- Update tests with new bifrostlib functionality
- Split tests into fast and slow (or unit/integration) so that the watchdog runs quick ones first and then bigger ones after for faster feedback loops
- Fix issue where a component requirement isn't working. Currently it's checking off it's own id and not that of the target.
- push newest bifrostlib to all components
- turn bifrost into bifrostlib submodule and reporter submodule so that bifrost is just the collection and documentation organization
- Create version tag for all components and check dockerhub (update github actions)that it reflects properly HOT 1
- Adjust sample_component path to include final path not just sample path
- Fix for bifrost_run_launcher test will affect other tests as calling run_program isn't neccesary or desired now
- Requirements not passed failing the component
- QC score HOT 4
- chewBBACA component for Bifrost HOT 4
- Documentation link at readme.md yields a 404
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from bifrost.