Comments (4)
@avehtari can we close this now that BB is added in loo 2? Or do you want this as something separate/additional?
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Let's discuss this next week
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Unsure how much of this was ever implemented -- if it was, it should probably be emphasized more in the vignettes, since I didn't see anything related to it besides a small mention that it can be used as part of model stacking algorithms. (Although I may have missed it!)
If the Bayesian bootstrap has been added, histospline smoothing may be worth looking at for improving inference with small samples. I'm not 100% sure whether BCa can be extended to the Bayesian bootstrap as well, but if so, that might be interesting to add later on.
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Bayesian bootstrap is used by loo_model_weights()
which has documentation with examples.
Based on https://arxiv.org/abs/2008.10296 and related additional experiments, it seems the benefit of Bayesian bootstrap in uncertainty estimate is smaller than what I assumed in 2017 when creating this issue. I close this now. If you are interested in histospline, the discussion related to would be better elsewhere or in a new issue.
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Related Issues (20)
- Adding "loo" criterion with add_criterion and moment_match=TRUE is failing even when save_pars(all=TRUE) was set during model fit HOT 12
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- `.wvar` internal function isn't calculating the right thing HOT 1
- Inconsistent Pareto k-values for SIS? HOT 10
- Update to new Stan array syntax
- Fix unbalanced knitr chunk delimiters
- Don't warn about slightly large khats
- Update E_loo khat diagnostic HOT 3
- Subsampling loo diff_srs_est code differs from eq (9) HOT 11
- possible typo in LFO-CV vignette HOT 1
- Improved mcse_elpd_loo HOT 4
- Use more functions from the posterior package
- E_loo fails with github version of posterior HOT 5
- pareto_khat with tail = "both" returns NA when either tails are constant HOT 1
- loo_moment_match_i computes wrong p_loo
- loo_moment_match fails if new log likelihood is -Inf
- Port C++ psis code to loo?
- Stan log_prob exceptions cause moment_matching to fail
- `loo_R2` can fail on examples where it worked before HOT 4
- Add support for Jacobian adjustment
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