Comments (1)
You are correct. I removed that include and it compiles fine. That include is for a new method that is in the works but not yet implemented and was inadvertently included.
I have checked in an updated version. Could you please update to that one and let me know if you have any further problems.
Sorry for the trouble.
Mary Kate
from bamutil.
Related Issues (20)
- Building bamUtil returns error: undefined reference HOT 4
- Cut middle of reads HOT 2
- `bam diff` should exit with a return code
- Dedup does not work from std/in HOT 2
- Cannot Compile NonPrimaryDedup Branch HOT 5
- cannot consume -.ubam on a pipe HOT 2
- Makefile should not ignore system LDFLAGS
- `bam diff` seems to return the reads that look identical between A and B HOT 1
- the clang compiler does not support -pg option on versions of OS X 10.9 and later HOT 4
- Error building from source: libStatGen HOT 3
- BamUtil: recab error: failed to open reference genome HOT 6
- bam2FastQ generates empty fastq files
- bash -x testBam2FastQ.sh and bash -x testMergeBam.sh failed on centos8_aarch64
- can not install with conda HOT 2
- bamutil diff - Get record for every read being compared HOT 2
- build is broken due to deprecated git protocol HOT 1
- Odd stats reported for clipOverlap
- License? HOT 1
- splitChromosome without header?
- Erroneous CIGAR string after clipOverlap HOT 1
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