stephenhwang Goto Github PK

bme_230b_final_project

bme_237_final_project

BME 237 Final Project: Analysis of Solid Tumor Tissue Archetypes through Bulk RNA-seq Deconvolution and Differential Gene Expression Analysis

covid19_network_modeling

Bruins in Genomics: Covid-19 Modeling Hackathon

docprofiles

Compute document array profiles for an input text

dotfiles

gpu_smith_waterman

gsa-is

Inducing enhanced suffix arrays for string collections [DCC'16, TCS 2017]

integrate-guide-rna-tool

Program for INTEGRATE guide RNA generation and off-target evaluation

ke-complex_modifications

Karabiner-Elements complex_modifications rules

klib

A standalone and lightweight C library

kubernetes

Various snippets and tooling to use a kubernetes cluster

memo

MEMO: MEM-based pangenome indexing for k-mer queries

memo_experiments

Experiments related to MEMO.

moni

MONI: A Pangenomic Index for Finding MEMs

my_plotnine

Plotnine theme and examples

poetry_mamba

Example of using Poetry and Mamba for Python package and environment management.

sjhwang-zmk-config-zen-2

ZMK configuration repo for v2 of the Corne-ish Zen keyboard

t2t-sgdp

ucsc_ms_thesis

LaTeX templates for UCSC thesis and/or advancement (thesis proposal)

ucscbioinformaticsclub

Practice and learning resources for UCSC Bioinformatics Club

vg

tools for working with genome variation graphs

vim-surround

surround.vim: Delete/change/add parentheses/quotes/XML-tags/much more with ease

vimwiki

Personal Wiki for Vim