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awesome-multimodal-large-language-models

:sparkles::sparkles:Latest Papers and Datasets on Multimodal Large Language Models, and Their Evaluation.

biomedgpt

BiomedGPT: A Unified and Generalist Biomedical Generative Pre-trained Transformer for Vision, Language, and Multimodal Tasks

cde-semantic-model

Semantic data model of the set of common data elements for rare disease registration

chainforge

An open-source visual programming environment for battle-testing prompts to LLMs.

deepvariant

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

dnabert_2

The official implementation of DNABERT-2.

fastq-to-fasta-

Fastq to fasta conversion

fastq2fasta

simple fastq to fasta conversion

fastq_to_fasta

A python script to convert FASTQ to FASTA

flowise

Drag & drop UI to build your customized LLM flow

fq2fa-scripts

Collection of various scripts

genienlp

GenieNLP: A versatile codebase for any NLP task

genomenlp

genomeprep

To preprocess, quality control and prepare consumer DTC genomes for research

genozip

A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/GVF, 23andMe...), up to 5x better than gzip and faster too

gpn

Genomic Pre-trained Network

gradio

Create UIs for your machine learning model in Python in 3 minutes

gto

A genomics-proteomics toolkit

gtz

A high performance and compression ratio compressor for genomic data, powered by GTXLab of Genetalks.

harc

Fastq compression

hyperopt

Distributed Asynchronous Hyperparameter Optimization in Python

illumina-utils

A library and collection of scripts to work with Illumina paired-end data (for CASAVA 1.7+ pipeline).

jarvis

Efficient lossless compression of genomic sequences

khmer

In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more

langchain

⚡ Building applications with LLMs through composability ⚡

linkml-project-cookiecutter

A cookiecutter for linkml projects. An equivalent of `linkml-ws new project-name`.

litbatch

llava-med

Large Language-and-Vision Assistant for BioMedicine, built towards multimodal GPT-4 level capabilities.

metatransformer

Meta-Transformer for Unified Multimodal Learning

mmc4

MultimodalC4 is a multimodal extension of c4 that interleaves millions of images with text.