svijayakumar32 Goto Github PK

book

cobratoolbox

The COnstraint-Based Reconstruction and Analysis Toolbox

codebase

e-photosynthesis-potato

escher

Build, view, share, and embed pathway maps.

essdive-leaf-gas-exchange

READY TO USE. Documentation associated with the leaf-level gas exchange data and metadata reporting format for the ESS-DIVE repository

falconet

The FALCONET R package enables to build and visualise metabolic maps of GEM automatically with aid of cellDesigner 4.4 and R platform

gecko

Toolbox for including enzyme constraints on a genome-scale model.

gemsplice

git-advance-example

git-intermediate-kurs

km_prediction

matlab-plotting

Code for bending Matlab's figures to your will.

mattfa

A Matlab implementation of Thermodynamics-based Flux Analysis

metabolic_modelling_website

mining-rubisco-kinetics

msuracifit

Fitting A/Ci curves with simple R scripts and a Shiny interface

multi-objective-optimization-of-gut-community-metabolic-model

Source code and information for journal article Social dynamics and modeling of chrono-nutrition

ode_fba_photosynthesis2021

Scripts supporting the soon-to-be-submitted ODE-FBA photosynthesis work

optifitaci

OptiFitACi with the R function fitacis4 and test data & R scripts

photogea

Analyzing photosynthetic gas exchange data

photosynthesis_temperature_response_models

Models the response of net assimilation to rising leaf temperature

plantecophys

Analysing and Modelling Leaf Gas Exchange Data in R

ploscomp2017

Supplementary Information

svijayakumar32

Config files for my GitHub profile.

synechococcus-metabolic-modelling

Bi-level regularized flux balance analysis of Synechococcus spp. PCC 7002

tidytuesday

Official repo for the #tidytuesday project

tsee

an elastic embedding method to visualize the dynamic gene expression patterns of time series single-cell RNA sequencing data

visnetwork

R package, using vis.js library for network visualization

yeast-gem

The consensus GEM for Saccharomyces cerevisiae