Error: names in input file does not match with design file

[user9301]

Error: names in input file does not match with design file

[tbaccata]

Hello,

In the design_trial1.txt file there is an additional trailing whitespace in the sample E:\\projects\\p29033\\tkoiWATProteome\\20240201_016_S633866_iWAT_FL2_DIA.d .
This is why you get the error of the mismatching samples in the input file.

The 2nd design design_trial2.txt would only work, if you renamed the .d column names accordingly.

Best,
Sebastian

[user9301]

Hello,

Thank you for your reply. I tried changing the names in the matrix file and running it again. It still didn't work. Could you please have a look?
report.pg_matrix.tsv__trial2.txt
contrasts_trial2.txt
design_trial2.txt

[tbaccata]

There was a trailing white space after FL2 in design_trial2.txt.
If you remove it amica can process it.

Best,
Sebastian

[user9301]

Thank you. It worked :)