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bioqc

Detect tissue heterogeneity in gene expression data with BioQC

chorus_update_sop

SOP definitions

coregistration

Use Jupyter Notebook "coregistration pipeline no imzml.ipynb" from the repository below to co-register your MALDI MSI and fluorescent microscopy images! Use ion_maker.py to produce ion images from your imzML files. More in the readme below!

cpp11

cpp11 helps you to interact with R objects using C++ code.

dataverse

Open source research data repository software

distributed-cellprofiler

Run encapsulated docker containers with CellProfiler in the Amazon Web Services infrastructure.

docker-dropbox

:whale: Dropbox in a Docker container

fastde

fastde-cpp

c++ code for fastde

keyrings.alt

kmerhash-sc2018-results

lz4

Extremely Fast Compression algorithm

matrix

:exclamation: This is a read-only mirror of the CRAN R package repository. Matrix — Sparse and Dense Matrix Classes and Methods. Homepage: http://Matrix.R-forge.R-project.org/ Report bugs for this package: https://r-forge.r-project.org/tracker/?group_id=61

mxx

C++11 Message Passing

pyfilesystem2

Python's Filesystem abstraction layer

robin-hood-hashing

Hashtable based on Robin Hood Hashing

s3fs

Amazon S3 filesystem for PyFilesystem2

seurat

R toolkit for single cell genomics

smhasher

Automatically exported from code.google.com/p/smhasher

sparsehash

Automatically exported from code.google.com/p/sparsehash

synapseannotations

Sage Bionetworks derived standards for annotating content in Synapse.