problems using sbolXmlToJson on synbiohub files

[teselagen]

problems using sbolXmlToJson on synbiohub files

[tnrich]

Hi @linediconsine thanks for reaching out. It looks like there are indeed some problems with the sbol xml parser. I'll need to look into those and will reach back out shortly.

[linediconsine]

Thanks!
I also created a repo with the above test

https://github.com/linediconsine/SBOL2json

I hope this helps

[linediconsine]

@tnrich Can you point me to some examples/docs on how the information should be stored in the JSON?

For example, How do you store strand information in the JSON format?

Thanks

[tnrich]

https://github.com/TeselaGen/ve-sequence-parsers#format-specification @linediconsine hope that helps :)

[tnrich]

@linediconsine does the link above answer your question? Happy to pair if you need more guidance :)

[linediconsine]

@tnrich I do have some questions,

let me get back to you when I complete my review

Thanks

[tnrich]

@linediconsine just checking in, everything going well for you on this?

[linediconsine]

Hi @tnrich,
I created this PR #223

Thanks