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activityspace_jrsi2014

Theory and data for simulating fine-scale human movement in an urban environment

ahm

A geodjango based webmap using leafletjs....

albacore

Dockerfile for the Albacore basecaller from Oxford Nanopore

albatradis

Comparative TraDIS analysis

ampliseq

16S rRNA amplicon sequencing analysis workflow using QIIME2

ansible-almalinux9-docker

ansible-amr-hackathon

ansible script to setup VMs for CLIMB-AMR-HACKATHON https://www.climb.ac.uk/amr-workshop/

ansible-role-galaxycloud

ansible-role-laniakea-irida

Ansible role to install IRIDA using Galaxy in a docker.

ansible-slurm-climb

Ansible playbook for installing SLURM based cluster on CLIMB (Cloud Infrastructure for Microbial Bioinformatics)

ansible-slurm-tower

Ansible scripts to setup dependencies for running nextflow pipelines via Tower.nf on a Linux VM

anviserver

The code behind anvi'server

ariba

Antimicrobial Resistance Identification By Assembly

ariba-publication

Supplementary data and scripts for ARIBA publication

atlas

ATLAS - Three commands to start analysing your metagenome data

awesome-deepbio

A curated list of awesome deep learning applications in the field of computational biology

awesome-flask

A curated list of awesome Flask resources and plugins

bactmap

WIP: A mapping-based pipeline for creating a phylogeny from bacterial whole genome sequences

bayes_algorithm

This program will help people who are learning Bayesian data analysis to understand MCMC more easily

bio-tradis

A set of tools to analyse the output from TraDIS analyses

bioconda-recipes

Conda recipes for the bioconda channel.

biodiverse

A tool for the spatial analysis of diversity

bootleaf

Template for building simple and elegant web mapping applications with Bootstrap 3 and Leaflet

brownie

Automatically exported from code.google.com/p/brownie

bryn

The CLIMB management web interface

bsmapp

BaseSystem Management Project

ca-tract-shiny

shiny app for california census tract package

cartographer

Interactive maps in R using d3-carto-map

cattle-movement-model

A script modelling movement of cattle with mixing of herds occuring.

cdcfluview

:mask: R package to Retrieve U.S. Flu Season Data from the CDC FluView Portal (WHO & ILINet)