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Name: Theresa Swayne
Type: User
Company: Columbia University
Location: New York, NY
Blog: https://www.cancer.columbia.edu/research/shared-resources/confocal-and-specialized-microscopy
Name: Theresa Swayne
Type: User
Company: Columbia University
Location: New York, NY
Blog: https://www.cancer.columbia.edu/research/shared-resources/confocal-and-specialized-microscopy
Code for image analysis of ratiometric biosensors
ImageJ scripts for analysis of yeast bud scars
Scripts for the Burguete and St.George-Hyslop labs
Miscellaneous CellProfiler pipelines and related code
Scripts for analysis of whole-slide images stained with DAB
The codes I used to generate random sections and run my analysis for stereo logy
ImageJ scripts for analyzing yeast contractile ring closure
Scripts to monitor and summarize usage of core facility instruments
Coursework
CellProfiler colocalization pipelines
Scripts for processing and plotting data
Updated to save ROIs, results, and log; accommodates different peak heights for each channel.
Custom plugins and macros for ImageJ and Fiji
Macros and scripts for the Chang lab
Analyzing mitochondrial localization of MEN proteins using R
Accessory scripts for Mitograph
Lectures for a napari training course
NIS Elements macros, jobs, and scripts
Scripts to locate nuclei and analyze nuclear and cytoplasmic fluorescence
ImageJ scripts for analyzing nuclei intensity and overlap in brain sections
Calculate percent dead cells by taking the ratio between counts in two channels
ImageJ scripts to simulate random cell distributions. Used to test significance of localization patterns.
ImageJ scripts for stereology and morphometry
Tools for counting cells in tissue sections and comparing with manual counts
Scripts for analyzing fibrosis in heart images
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Open source projects and samples from Microsoft.
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Data-Driven Documents codes.
China tencent open source team.