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Tiago's Projects

delly icon delly

DELLY2: Structural variant discovery by integrated paired-end and split-read analysis

hikaku icon hikaku

This R function returns comparative log2 ratio analysis and mean peak area heatmap comparison from label-free proteomics or an exploratory graphical sample data analysis.

maf2anno-split icon maf2anno-split

This Perl script splits a TGCA .maf file into separated sample files and annotate each of them using ANNOVAR (hg19) instaled at /share/apps/ANNOVAR.

pipes icon pipes

Streamlined pipelines using Snakemake

woland icon woland

WOLAND is a multiplatform tool to analyze point mutation patterns using resequencing data from any organism or cell. It is implemented as a Perl and R tool using as inputs filtered unannotated or annotated SNV lists, combined with its correspondent genome sequences.

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