timknut Goto Github PK
Name: Tim M. Knutsen
Type: User
Company: Norwegian University of Life Sciences
Bio: Bioinformatics. Sequence. Genotypes. R.
Location: Norway
Name: Tim M. Knutsen
Type: User
Company: Norwegian University of Life Sciences
Bio: Bioinformatics. Sequence. Genotypes. R.
Location: Norway
basic walk-throughs for alignment and variant calling from NGS sequencing data
R data package for annotating/converting Gene IDs
ASreml R-wrapper
Small scripts for working with sequence data at CIGENE
SV detection from paired end reads mapping
Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1
The Leek group guide to data sharing
dotfiles
Documentation and code base for the Geno/Roslin imputation project
Plot a pairwise LD matrix from vcftools with ggplot2.
Make manhattan plots with ggplot2.
Code base for the Bovine "impute to sequence" project at Cigene.
a collection of knitr examples
Connect to ODBC databases (using the DBI interface)
Useful bash one-liners for bioinformatics.
R code for creating Manhattan plots and Q-Q plots for GWAS
R for data science
Repository for the CIGENE R workshops.
Writing reviews of academic papers
Barnehage
Automatically create and send slurm scripts to the Cigene cluster.
Scripts to report from and make changes to SNP-files
repository for http://timknut.github.io
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