timoast Goto Github PK
Name: Tim Stuart
Type: User
Company: Genome Institute of Singapore
Twitter: timoast
Location: Singapore
Blog: stuartlab.org
Name: Tim Stuart
Type: User
Company: Genome Institute of Singapore
Twitter: timoast
Location: Singapore
Blog: stuartlab.org
Analysis of TE presence/absence data
Analysis of cell-type-specific DNA accessibility peaks with convolutional neural nets
Processing pipeline for single-cell barcoded Tn5 assays
Code to process raw scATAC-seq data from BICCN
A look at some bioRxiv metrics
Processing pipeline for public multiome and scATAC-seq immune datasets
Fragment file format specification
Quality control for methylome data
Web app for the methylQC package
Re-mapping of Granja et al. (2019) scATAC-seq data to hg38
Re-processing single-cell multiCUT&Tag data from Gopalan et al. 2021
IPython notebook for NGS library quantitation by qPCR
Miscellaneous tools for genomics
Template for a computational lab notebook using bookdown
Analysis of structural rearrangements in NPQ promoter
Analysis of ATAC data for Arabidopsis salt stress
Collections of library structure and sequence of popular single cell genomic methods
Single cell RNA-seq tools
Code to reproduce analyses shown in the Signac paper
Tools for single-cell data processing
Code to process raw SNARE-seq ATAC reads
Personal R package
Analysis of transcription factor bindng sites within transposable elements
Uses paired-end sequencing data to find transposable element variants
My site
UCLA T32 Single-Cell Analysis Workshop
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.