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shawa avatar shawa commented on June 6, 2024

Only a minor modification to the sparql needed to put this in.

I'm wondering about chebi_1234124112 we want to deviate from chebi:1234124112?
ATM it returns the full URI, but that can be transformed to w/e we need before serving it back to Panacea.

fcfbecb

On a side note, it seems to be slowing down the test query we've been working against:

› time curl localhost:5000/ddis -X POST -d '{"drugs": ["chebi:421707", "chebi:465284", "dinto:DB00503", "chebi:9341"]}'
[
  {
    "drug_a": "http://purl.obolibrary.org/obo/CHEBI_421707",
    "drug_b": "http://purl.obolibrary.org/obo/CHEBI_465284",
    "label": "abacavir/ganciclovir DDI",
    "uri": "http://purl.obolibrary.org/obo/DINTO_05759"
  },
  {
    "drug_a": "http://purl.obolibrary.org/obo/CHEBI_421707",
    "drug_b": "http://purl.obolibrary.org/obo/DINTO_DB00503",
    "label": "abacavir/ritonavir DDI",
    "uri": "http://purl.obolibrary.org/obo/DINTO_11043"
  }
]
curl localhost:5000/ddis -X POST -d  -H 'Content-Type: application/json'  0.01s user 0.01s system 0% cpu 8.897 total

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houli avatar houli commented on June 6, 2024

Oh I just threw together those identifiers, instead of returning the uri of a and b I think just giving back chebi:123 etc. as the cause is what we should do

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shawa avatar shawa commented on June 6, 2024

#85

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