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Tom Koch's Projects

brew-evolution icon brew-evolution

:fast_forward: Proposals for changes to the Homebrew package manager.

dataverse icon dataverse

A data repository framework to share and publish research data.

diamond icon diamond

Accelerated BLAST compatible local sequence aligner.

gengis icon gengis

GenGIS (pronounced 'Genghis' like Genghis Khan) is a bioinformatics application that allows users to combine digital map data with information about biological sequences collected from the environment. GenGIS provides a 3D graphical interface in which the user can navigate and explore the data, as well as a Python interface that allows easy scripting of statistical analyses using the Rpy libraries.

heatmap-app icon heatmap-app

A Shiny App for Interactive Gene Expression HeatMap Visualisation

homebrew-cask icon homebrew-cask

A CLI workflow for the administration of Mac applications distributed as binaries

intermine icon intermine

A powerful open source data warehouse system

oraclexe-apex icon oraclexe-apex

Oracle XE & APEX build script along with images for popular cloud platforms

pv icon pv

WebGL protein viewer

snipeit-install icon snipeit-install

Installs the Snipe-IT Open Source Asset Management Application on Debian 10/11

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