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blm

This repository contains all code for the python implementation of distributed OLS for locally stored data.

blmm

This repository contains all code for the BLMM toolbox.

blmm-sandbox

This is the sandbox repository for Big Linear Mixed Models

blmm-testdata

brainhack_cloud

broccoli

BROCCOLI: Software for Fast fMRI Analysis on Many-Core CPUs and GPUs

code-is-science

Scientific code needs to be open source and peer reviewed

confounds

Python implementation of the fMRIb UK Biobank confounds code.

crtoolbox

crtoolbox_demo

This repository contains a demo notebook for the CR practical given at OHBM 2023.

dm-template

generate-funnelplot

hackathon2019

Website and projects for the OHBM Hackathon in Rome 2019

ibma

Image-Based Meta-Analysis toolbox

ibma-pbsim

Publication bias simulations for the IBMA toolbox.

ibma_figures

Rough code for figures generated for IBMA

lmmpaper

machinelearning2023

This repository contains the code used for the 2023 machine learning course I gave as part of the interdisciplinary bioscience CDT programme, University of Oxford.

mnist-tf

Tensorflow implementation of MNIST classifying with Tensorboard evaluation

nidm

Neuroimaging Data Model (NIDM): describing neuroimaging data and provenance

nidmresults

A Python library for the Neuroimaging Data Model (NIDM-Results)

nidmresults-examples

A set of test data to generate NIDM-Results examples

nidmresults-fsl

A python library to export FSL's feat results to NIDM-Results

nidmresults-fslhtml

Generate a set of FSL-like HTML pages from a NIDM-Results pack

nidmresults-randomise

This repository contains code for exporting NIDM-Results packs from randomise using the minimal json API.

nidmresults-spm

A python library SPM results into NIDM-Results packs

nidmresults-spmhtml

Viewing NIDM-Results in a HTML format.

nidmresults-viewers-paper

Example HTML output for NIDM-Results display

nilearn2023

nisox-bdi.github.io