Comments (3)
Note: function should be part of TrIAS R package, not this repository.
from indicators.
point 1,2,3 not present anymore in the pipeline. But I the checks have been written and I think they are still very useful while merging checklists.
from indicators.
Rather than a function, we opted to use basic R and rgbif functionality: https://github.com/trias-project/pipeline/blob/master/src/occurrences.Rmd. Closing issue.
from indicators.
Related Issues (20)
- GRIIS Belgium query HOT 1
- Preprocessing for occurrence based indicators HOT 4
- Check correctness of links in source column in checklist indicators dataframe HOT 1
- Revision of EU species list HOT 1
- add entry into force for 4th batch species HOT 1
- Maybe clarify that the GAM trends are not to be understood as an estimate of observations / occupancy HOT 1
- Rename master branch to main HOT 1
- Add taxonomic distribution of emerging species at class level HOT 1
- Use GBIF checklist to refer to species of EU concern
- Add graphs for pathways level 2 HOT 1
- Some eea_cell_codes from baseline are corrupted HOT 2
- deposit TrIAS indicator outputs on zenodo HOT 1
- include TrIAS logo on graphs
- create zip file with all graphs HOT 1
- Update Belgian occurrence indicators based on corrected cubes HOT 7
- Create list of new (appearing) alien species in Belgium HOT 5
- Update Belgian checklist indicators HOT 1
- Output of GAM results in script 07_occurrence_indicators_modelling.Rmd overwritten HOT 1
- Use new trias package version to define width and height GAM figures
- create occurrence based indicators at regional level HOT 1
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