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bamcoverage

BamCoverage: A efficient software tools to calculate every site depth of genome based bam files

bamdeal

BamDeal: a comprehensive toolkit for bam manipulation

conifer

Calculate confidence scores from Kraken2 output

damage-estimator

docxtemplater-build

Built versions of docxtemplater

expar-design

find_differential_primers

Code for design of diagnostic PCR primers, and metabarcoding markers.

fxtools

FxTools: a comprehensive toolkit for FASTA and FASTQ file manipulation

geekbang-go

极客时间 《Go 语言项目开发实战》课程补充教程。

geekbanglinux

Linux 实战技能100讲

glapd

design common and specific primer for LAMP using the whole genome

haoel.github.io

host-microbelrti

Code required for analysis of Host and Microbe presented in: Integrating Host Response and Unbiased Microbe Detection for Lower Respiratory Tract Infection Diagnosis in Critically Ill Adults

ibooks

计算机图书,java,mysql,架构类,web

kart

Kart: A divide-and-conquer algorithm for NGS read mapping with high error tolerance

kmer-cnt

Code examples of fast and simple k-mer counters for tutorial purposes

komplexity

A method of assessing sequence complexity based on kmer frequencies

krakentools

KrakenTools provides individual scripts to analyze Kraken/Kraken2/Bracken/KrakenUniq output files

mngs

Shotgun metagenome assembly and gene prediction

ncbi-genome-download

Scripts to download genomes from the NCBI FTP servers

ngs-analysis

二代测序数据分析

pproject

primedrpa

pyvenn

2 ~ 6 sets venn diagram for python

readfq

Fast multi-line FASTA/Q reader in several programming languages

soapnuke

multi-threaded software for rapid quality control and preprocessing of high throughput sequencing data specified for different experiments

splitbarcode

barcode demultiplexing

stag-mwc

StaG Metagenomic Workflow Collaboration

tensorflow-101

《TensorFlow 快速入门与实战》课件与参考代码

uvp

Mycobacterium tuberculosis next generation sequence analysis