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Tyler Myers's Projects

16s_sentence_embedding_taxonomy icon 16s_sentence_embedding_taxonomy

Comparison between qiime2 methods of classifying 16S reads and NLP sentence embedding projection. The objective is to keep relative performance the same but substantially reduce the time to classify reads.

brca-exchange icon brca-exchange

Overall management and deployment of the BRCA Exchange web portal and pipeline scripts

esa-microbial icon esa-microbial

ESA-DNA modifications to allow integration with microbial genomes

pubmed_summarize icon pubmed_summarize

NLP pipeline to summarize the relevant literature so I can save time and not read 1000+ publications

synbio icon synbio

A sleek single-page website template with a splash of colour by @haydenryan - OnePagers.

tda_gpt_microbiome icon tda_gpt_microbiome

Mapper implementation for microbiome feature selection, GPT metadata + table embedding for ML tasks, synthetic microbiome generation for corr variables of interest.

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