ulelab Goto Github PK
Name: Ulelab
Type: Organization
Location: London
Name: Ulelab
Type: Organization
Location: London
tools related to identification & characterisation of cryptic Alu-exons
Find groups of motifs around genomic landmarks of interest
Repository for Data Science Issues in Understanding Protein-RNA Interactions
A tool to facilitate comparative visualisation of CLIP data
A wrapper around scipy "find_peaks" function to enable peak calling of CLIP data.
CLIP sequencing analysis pipeline for QC, pre-mapping, genome mapping, UMI deduplication, and multiple peak-calling options.
Get clusters of k-mers based solely on their sequence or in combination with enrichment in PEKA.
An algorithm for scoring Generalised RNA Multivalency
Filtering GENCODE or ENSEMBLE annotation in GTF format. Annotating missing regions in iCount genomic segmentation.
iCount, protein-RNA interaction analytics
This repository contains the source code used for bioinformatic analyses presented in the paper by Modic et al., 2024 "Poised PABP-RNA hubs implement signal-dependent mRNA decay in development".
iCLIP and miCLIP mapping pipeline to account for repetitive ncRNAs, especially snRNA, rRNA and tRNA.
A short pipeline to test nf AWS batch performance
Find motifs enriched around prominent crosslinks
Download and prepare ENCODE eCLIP raw fastq for processing with the nf-core/clipseq pipeline
Plot CLIP crosslinks around regulated exons to study position-dependent impact on pre-mRNA splicing.
Sources of small RNAs used for pre-mapping.
Repository for "TDP-43 condensation properties specify its RNA binding and regulatory repertoire"
Ultra-fast 5' and 3' demultiplexer
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.