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3d-mri-brain-tumor-segmentation-using-autoencoder-regularization

Keras implementation of the paper "3D MRI brain tumor segmentation using autoencoder regularization" by Myronenko A. (https://arxiv.org/abs/1810.11654).

abc

git clone of http://www.nitrc.org/projects/abc/

add_lib

Additional libraries

ants

Advanced Normalization Tools (ANTs)

assemblynet

AssemblyNet: 3D Whole Brain MRI segmentation pipeline

bag-of-local-features-models

Pretrained bag-of-local-features neural networks

c3d

Obsolete

centris

Predict real-estate prices in Montreal

civet

CIVET Cortical Surface Extraction Pipeline

clearswi.jl

improved susceptibility weighted imaging using multi-echo aquisitions

cloudcompare

CloudCompare main repository

collisions

compas-analysis

Data and analysis for 'Machine Bias'

conda-recipes

Conda recipes for building minc-toolkits

conda-recipes-forge

convert3d

Convert3D from http://www.itksnap.org/pmwiki/pmwiki.php?n=Convert3D.Downloads with changes from BIC, updated to ITKv5

cork

3D Boolean / CSG Library

cortex_walk

cortical_surface

Cortical surface approximation for CIVET

csvutils

A set of command-line utilities for managing CSV data using the libcsv library.

darq

Deep learning of quality control for stereotaxic registration of human brain MRI

deep-pi

An example of running deep learning network on Raspberry-PI

deep-qc

Deep learning for MRI registration quality control

deepdream.torch

Torch version for https://github.com/google/deepdream

display

Lightweight browser-based display server

dsh-pytorch

PyTorch implementation of DEEP SUPERVISED HASHING FOR FAST IMAGE RETRIEVAL(CVPR 2016)

elastix

Toolbox for rigid and nonrigid registration of images, cloned from https://github.com/mstaring/elastix

elastix-1

Official elastix repository

elastix_04_5

MINCified version of elastix 4.5

fadernetworks

Fader Networks: Manipulating Images by Sliding Attributes - NIPS 2017