vladimirshitov Goto Github PK

algoritms_book

biohack_2023

Contrastive learning for single-cell sample representation

bioinformatics_institute

Homework assignments for the Bioinformatics Institute courses

c-_uni_course

cat_decision_tree

Decision tree classifier for categorical data

cells_model

cloudpred

Predicting Individual Outcome From Heterogeneous Point Clouds

communiquer

Interface for the several tools that predict cells communication from Single-Cell RNA sequencing data

demultiplexing-tools

django-dynamic-formset

A jQuery plugin that allows you dynamically add new forms to a rendered django formset.

donor_list

Self-made database for donors. Based on doubly linked list

easy_3d

ehrapy

Electronic Health Record Analysis with Python.

exome_p

Application to store and search for STR and SNP data

fasta_scripts

Scripts I use in work with fasta protein or nucleotide sequences, so my life would be easier

fuchsia

A simple minimal distance classifier for university course

genomes_mapping

Project for mapping genomes of Escherichia coli.

gisaug

A library for Time Series augmentation. Created for geological data, but can fit any type of Time Series as well

handyproject.github.io

k_vector

nafig

"NA Figure": visualization of the missing data distribution

network_theory_course

networkx_drawing_self_loops

By default, networkx has problems with drawing self-loops in graphs. This repository provides code that you can use to plot self-loops correctly

notebooks

Random jupyter-notebooks

open-problems-multimodal-3rd-solution

open-problems-multimodal-3rd-solution

patterns_search

phemd

Identifying cell subpopulational differences among single-cell biospecimens

pillow_friend

Pillow you can shout to

prigen

Tool for generating nucleotide sequences with desired properties (GC-content, length and melting temperature)

pydeseq2

A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.