vpeddu Goto Github PK
Name: Vikas Peddu
Type: User
Company: UC Santa Cruz
Bio: Graduate student at @UCSC-Daniel-Kim-Lab interested in liquid biopsy and nanopore sequencing
Twitter: vikaspeddu
Location: Santa Cruz, CA
Vikas Peddu's Projects
annotate_fungal_refseq
annotate just fungal refseq for clomp
annotate_refseq
oof
apomp
bioinformatics-r
bioinformatics-scripts
Miscellaneous bioinformatic scripts I make
bme237-final
bmebootcamp-metagenomics
clomp
UW Virology's Clinically OK Metagenomic Pipeline
clomp-cfdna
:horse: CLinically Okay Metagenomic Pipeline :horse:
clomp-dashboard
Dashboard for CLOMP metagenomics data
cmv-nipt
Hunting for CMV and HHV-6 in cfDNA sequence
csumb_bioinfo_workshop_2024
CSUMB 2024 bioinformatic workshop
debrowser
Differential Count Data Analysis Toolbox
diffmod_analysis
dorado_basecall
basecalling and demux with dorado
genomebrowser_tracks
hosting things for genome browser exploration
green_monkey_grna_search
Human gRNA libraries are available through GeCKO but none (that are affordable) exist for the Green Monkey. Biologically, we're "close enough" to the green monkey that there should be adequate sequence homology in at least some of these targets. Here, I search for human gRNAs that can be found in the Green Monkey genome.
hpiv3-hn-secondary-structure
Characterizing the HPIV 3 HN gene RNA secondary structure
kim-lab-rotation
rotation in the Kim lab at UCSC
krab-liftover
kube_prp_test
lava
LAVA: Longitudinal Analysis of Viral Alleles
pavian
🌈 Interactive analysis of metagenomics data
rnaseq_cancer_biomarkers
Machine Learning to Detect Cancer Biomarkers from RNAseq Data
sars-cov-2-align
Automatically ull SARS-CoV-2 genomes and align against reference
sars-cov-2-subgenomic-nf
slowqc
Pipeline to go from raw Fastq files to DEBrowser/iDEP ready input
sra-pipeline
download sra files from SRA, pipe through fastq_dump and bowtie2 to S3, in a container
tebag
Transposable Elements By Age Group
tprk
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.