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2wr

A simple ReactJS + Formik application to allow structured data capture in the colorectal 2 week wait clinic for patients with suspected cancer.

azuretre

An accelerator to help organizations build Trusted Research Environments on Azure.

azuretre-deployment

comorbidipy

Python package to calculate comorbidity scores including Charlson Comorbidity Score and Elixhauser Score and their weighted variants.

dbt-synthea

[Under development] A dbt ETL project to convert a Synthea synthetic data set into the OMOP CDM

diagrams

:art: Diagram as Code for prototyping cloud system architectures

doccano

Open source annotation tool for machine learning practitioners.

esp8266-firmware

DeviceHive esp8266 firmware. Control hardware via clouds with DeviceHive!

gpu-jupyter

Leverage the flexibility of Jupyterlab through the power of your NVIDIA GPU to run your code from Tensorflow and Pytorch in collaborative notebooks on the GPU.

guacamole-client

Mirror of Apache Guacamole Client

jupyter-guacamole

⚠️⚠️⚠️⚠️⚠️ Under development, insecure, do not use! ⚠️⚠️⚠️⚠️⚠️

keycloak-client

Python client for Keycloak

md

MD Thesis: Cardiopulmonary exercise testing in pancreatic surgery.

medcat

Medical Concept Annotation Tool

negspacy

spaCy pipeline object for negating concepts in text

paesoe-test

paperscraper

A web scraping tool to systematically extract the text of scientific papers and corresponding metadata from university accessible journals.

patmanplus

Next-Gen Patient Lists for Junior Doctors - This will change the life of every junior doctor in the NHS and beyond!

pcam

The PatchCamelyon (PCam) deep learning classification benchmark.

pdfsizeopt

PDF file size optimizer

picmed

pytgithub-test

python

All Algorithms implemented in Python

react-forms

solrq

Python Solr query utility // http://solrq.readthedocs.org/en/latest/

tdriver

Python script to sort legacy patient docs.

test

uniport

Simple HTML application to integrate multiple electronic patient datasources.

vscode-binder

VS Code on Binder

whiterabbit

WhiteRabbit is a small application that can be used to analyse the structure and contents of a database as preparation for designing an ETL. It comes with RabbitInAHat, an application for interactive design of an ETL to the OMOP Common Data Model with the help of the the scan report generated by White Rabbit.