walaj Goto Github PK
Name: Jeremiah Wala
Type: User
Company: DFCI
Bio: Oncology Fellow | Dana Farber Cancer Institute / Mass General Brigham
Location: Boston, MA
Name: Jeremiah Wala
Type: User
Company: DFCI
Bio: Oncology Fellow | Dana Farber Cancer Institute / Mass General Brigham
Location: Boston, MA
Copy of distribution version of Apophenia, with added statistical models
The open source version of the AWS CLI User Guide
Burrow-Wheeler Aligner for pairwise alignment between DNA sequences
Tools for analyzing 10X Genomics data
Manubot CAR-T Review Paper
R package for processing highly multiplexed spatial imaging data (e.g. CyCIF)
CLI tools for CyCIF
C library for high-throughput multiplex imaging data formats
Command line tools for image processing using libvips
Download and process tracks from ENCODE
Command-line interface to Ensembl REST API
Standalone C library for assembling Illumina short reads in small regions
R package for applying Gamma-Poisson regression to identify statistical enrichment or depletion of somatic mutations in regions after correcting for genomic covariates.
Bayesian haplotype-based polymorphism discovery and genotyping.
Tools for 1D and 2D genomic significance analysis
R package for visualizing complex and multi-track 1D and 2D genomic data in GenomicRanges framework
R utilities and shortcuts
Simple C++ KD-Tree implementation
OBSOLETE and not updated any more libtiff mirror, see website for the new one
Convert NCBI taxonomy dump into lineages
Light-weight header library for C++ concurrency with pthread
Fast and memory efficient genomic range overlaps for R
C++ htslib/bwa-mem/fermi interface for interrogating sequence data
Basic command-line sequence analysis utilities I can't find elsewhere
Useful customizations of a unix environment
Explore rearrangements and copy-number amplifications in a cancer genome
Structural variation and indel detection by local assembly
Toolkit for extracting SVs from long sequences and benchmarking variant callers
Recurrent structural variations detection in cancer whole genomes
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.