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Derek Jones's Projects

al-folio icon al-folio

A beautiful, simple, clean, and responsive Jekyll theme for academics

atom icon atom

:atom: The hackable text editor

atom3d icon atom3d

ATOM3D: tasks on molecules in three dimensions

cs612final icon cs612final

Final project for Advanced Machine Learning (CS 612). Audio Classification via a Convolutional Neural Network

cv icon cv

repo for curriculum vitae

deep_protein_binding icon deep_protein_binding

repository for thesis project, learning molecular fingerprints for the classification of active versus decoy kinase binding interactions.

deepchem icon deepchem

Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology

fast-wavenet icon fast-wavenet

Speedy Wavenet generation using dynamic programming :zap:

h5py icon h5py

HDF5 for Python -- The h5py package is a Pythonic interface to the HDF5 binary data format.

jupyter-genomics icon jupyter-genomics

A collection of Jupyter notebooks authored by the UCSD Center for Computational Biology & Bioinformatics (http://compbio.ucsd.edu). These include methods on utilizing cloud computing resources and analysis of data from next-generation sequencing, systems biology, and microbiome.

lbann icon lbann

Livermore Big Artificial Neural Network Toolkit

ma721_hw1 icon ma721_hw1

Implementation of neural network for QSAR prediction

mailbot icon mailbot

a gmail parsing utility implemented as a python package

moses icon moses

Molecular Sets (MOSES): A Benchmarking Platform for Molecular Generation Models

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